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Summary
No random seeds are set anywhere in litchron/ or mcp_litchron/. The embeddings (PCA/UMAP/Leiden), the diffusion-map root
selection, Palantir waypoint sampling, and the baselines are stochastic, ...
scientific-rigor
[{ pcr : PCR0387 , status : Closed , wc : MT4000A , prog : Closed , proven : WIP , date : 2026-06-03 },{ pcr : PCR0391 ,
status : Closed , wc : MT4000A , prog : Closed , proven : Closed , date : 2026-06-03 ...
[{ pcr : PCR0387 , status : Closed , wc : MT4000A , prog : Closed , proven : WIP , date : 2026-06-03 },{ pcr : PCR0391 ,
status : Closed , wc : MT4000A , prog : Closed , proven : Closed , date : 2026-06-03 ...
Summary
Three of the five documented quality flags — baseline_disagreement_severe, root_cell_ambiguous, preflight_partial — are
declared but never computed anywhere. The control that should catch LLM ...
documentation
scientific-rigor
Goal
Make the deferred / offline traigent local sync story actually deliver cost to the portal. Today it is 100%
non-functional against the real backend.
Critical framing — this epic does NOT block the ...
area:sdk
enhancement
Summary
- Version: 2.3.4
- Timestamp: 2026-06-09T19:13:46.208245
- Local report: /home/joshu/.arenamcp/bug_reports/bug_20260609_191346.json
- Install ID: inst_ef1121cb079046dda2a1ab596e00203a ...
bug
ツール: Gitleaks(stripe-access-token) / Semgrep ERROR
影響ファイル:
- train.jsonl:13 — sk_live_xxxxxxxxxxxx...
- train.jsonl:78 — sk_live_xxxxxxxxxxxx...
問題: sk_live_ プレフィックスは本番環境のStripe秘密鍵を示す。学習データ(train.jsonl)に混入しており、リポジトリにコミット済み。即時無効化が必要。 ...
bug
Summary
Baseline-vs-LLM pseudotime agreement is computed with sign-sensitive rank correlations and no shared-root/direction
anchoring. A baseline that recovers the biologically correct lineage but is ...
scientific-rigor
Summary
The citation relevance gate is an uncalibrated cosine threshold over a general-purpose sentence encoder, and for PMIDs
it scores against the title only. It does not measure whether a paper supports ...
scientific-rigor
Severity: MEDIUM (architecture — settings lifecycle metadata)
Finding
app_settings has grown to ~900 flat keys with no per-key lifecycle metadata: no owner (which module/service reads it),
no type declaration, ...
backend
P2-medium
tech-debt

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